Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD48P09326 LINC00554-201ENST00000564841 3011 ntBASIC16.83■□□□□ 0.29
CD48P09326 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CD48P09326 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD48P09326 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD48P09326 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CD48P09326 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.83■□□□□ 0.28
CD48P09326 HAUS4P1-201ENST00000406739 1145 ntBASIC16.83■□□□□ 0.28
CD48P09326 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 GPX1P2-201ENST00000429271 606 ntBASIC16.83■□□□□ 0.28
CD48P09326 SPCS2P4-201ENST00000436160 681 ntBASIC16.83■□□□□ 0.28
CD48P09326 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.83■□□□□ 0.28
CD48P09326 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 MIR4321-201ENST00000592276 80 ntBASIC16.83■□□□□ 0.28
CD48P09326 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.83■□□□□ 0.28
CD48P09326 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.83■□□□□ 0.28
CD48P09326 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.83■□□□□ 0.28
CD48P09326 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.83■□□□□ 0.28
CD48P09326 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CD48P09326 C20orf181-201ENST00000623918 480 ntBASIC16.83■□□□□ 0.28
CD48P09326 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.83■□□□□ 0.28
CD48P09326 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.83■□□□□ 0.28
CD48P09326 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 HYMAI-201ENST00000635591 3347 ntBASIC16.83■□□□□ 0.28
CD48P09326 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CD48P09326 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.83■□□□□ 0.28
CD48P09326 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD48P09326 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.82■□□□□ 0.28
CD48P09326 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 AC142381.1-201ENST00000426099 345 ntBASIC16.82■□□□□ 0.28
CD48P09326 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.82■□□□□ 0.28
CD48P09326 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.82■□□□□ 0.28
CD48P09326 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.82■□□□□ 0.28
CD48P09326 AC105233.2-201ENST00000523697 349 ntBASIC16.82■□□□□ 0.28
CD48P09326 AF228730.5-201ENST00000530288 346 ntBASIC16.82■□□□□ 0.28
CD48P09326 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 LINC01225-203ENST00000563550 1244 ntBASIC16.82■□□□□ 0.28
CD48P09326 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 AL365330.1-201ENST00000607459 531 ntBASIC16.82■□□□□ 0.28
CD48P09326 AC008267.7-201ENST00000624570 1194 ntBASIC16.82■□□□□ 0.28
CD48P09326 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.82■□□□□ 0.28
CD48P09326 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD48P09326 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CD48P09326 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.82■□□□□ 0.28
CD48P09326 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms