Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHGBP05060 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHGBP05060 MRPS18AP1-201ENST00000414458 589 ntBASIC19.44■□□□□ 0.7
CHGBP05060 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 AC067863.1-201ENST00000494933 530 ntBASIC19.44■□□□□ 0.7
CHGBP05060 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.44■□□□□ 0.7
CHGBP05060 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.44■□□□□ 0.7
CHGBP05060 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.44■□□□□ 0.7
CHGBP05060 AL589739.1-201ENST00000607720 493 ntBASIC19.44■□□□□ 0.7
CHGBP05060 AL590560.3-201ENST00000623350 461 ntBASIC19.44■□□□□ 0.7
CHGBP05060 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHGBP05060 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CHGBP05060 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.44■□□□□ 0.7
CHGBP05060 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CHGBP05060 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.43■□□□□ 0.7
CHGBP05060 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CHGBP05060 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CHGBP05060 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.43■□□□□ 0.7
CHGBP05060 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHGBP05060 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHGBP05060 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.43■□□□□ 0.7
CHGBP05060 HIST3H2BA-201ENST00000436555 524 ntBASIC19.43■□□□□ 0.7
CHGBP05060 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.43■□□□□ 0.7
CHGBP05060 IGHV3-42-201ENST00000520410 361 ntBASIC19.43■□□□□ 0.7
CHGBP05060 AL512361.1-201ENST00000554200 418 ntBASIC19.43■□□□□ 0.7
CHGBP05060 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.43■□□□□ 0.7
CHGBP05060 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.43■□□□□ 0.7
CHGBP05060 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CHGBP05060 AL365330.1-201ENST00000607459 531 ntBASIC19.43■□□□□ 0.7
CHGBP05060 AL844908.2-201ENST00000609461 460 ntBASIC19.43■□□□□ 0.7
CHGBP05060 AC073592.8-201ENST00000624126 511 ntBASIC19.43■□□□□ 0.7
CHGBP05060 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.43■□□□□ 0.7
CHGBP05060 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHGBP05060 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHGBP05060 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.42■□□□□ 0.7
CHGBP05060 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHGBP05060 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
CHGBP05060 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.42■□□□□ 0.7
CHGBP05060 BCRP1-201ENST00000444246 691 ntBASIC19.42■□□□□ 0.7
CHGBP05060 AL158211.3-201ENST00000607385 239 ntBASIC19.42■□□□□ 0.7
CHGBP05060 AC004790.1-201ENST00000612686 536 ntBASIC19.42■□□□□ 0.7
CHGBP05060 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.42■□□□□ 0.7
CHGBP05060 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CHGBP05060 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.42■□□□□ 0.7
CHGBP05060 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.42■□□□□ 0.7
CHGBP05060 CDC14C-201ENST00000428251 1719 ntBASIC19.42■□□□□ 0.7
CHGBP05060 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.42■□□□□ 0.7
CHGBP05060 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CHGBP05060 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHGBP05060 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
CHGBP05060 PAUPAR-201ENST00000630360 2965 ntBASIC19.41■□□□□ 0.7
CHGBP05060 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
CHGBP05060 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.41■□□□□ 0.7
CHGBP05060 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHGBP05060 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.41■□□□□ 0.7
CHGBP05060 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms