Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 KRT8P39-201ENST00000396270 1433 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 TPM4P1-201ENST00000436100 807 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 FAAHP1-202ENST00000446499 1238 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 TERC-201ENST00000602385 541 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 AL121894.2-201ENST00000602977 491 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 PCGF3-213ENST00000620529 1899 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 AC069224.1-201ENST00000566372 1715 ntBASIC14.69□□□□□ -0.06
HLA-DPB1P04440 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MIR648-201ENST00000385046 94 ntBASIC14.68□□□□□ -0.06
HLA-DPB1P04440 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AC139887.3-201ENST00000568585 713 ntBASIC14.68□□□□□ -0.06
HLA-DPB1P04440 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AL589182.2-201ENST00000619332 1049 ntBASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AC148477.8-201ENST00000624298 468 ntBASIC14.68□□□□□ -0.06
HLA-DPB1P04440 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 TOP3BP1-201ENST00000420768 1380 ntBASIC14.68□□□□□ -0.06
HLA-DPB1P04440 AC243591.1-201ENST00000452967 1364 ntBASIC14.68□□□□□ -0.06
HLA-DPB1P04440 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPB1P04440 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms