Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CHRNA1P02708 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA1P02708 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA1P02708 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 TARDBPP1-201ENST00000442013 1203 ntBASIC17.52■□□□□ 0.4
CHRNA1P02708 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA1P02708 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA1P02708 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CHRNA1P02708 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA1P02708 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA1P02708 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA1P02708 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA1P02708 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA1P02708 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA1P02708 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.52■□□□□ 0.39
CHRNA1P02708 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA1P02708 AC092171.3-201ENST00000610122 2651 ntBASIC17.51■□□□□ 0.39
CHRNA1P02708 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA1P02708 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA1P02708 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNA1P02708 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA1P02708 MIR6799-201ENST00000620297 69 ntBASIC17.51■□□□□ 0.39
CHRNA1P02708 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA1P02708 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA1P02708 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA1P02708 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA1P02708 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
CHRNA1P02708 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA1P02708 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 SNX29P1-201ENST00000548357 1007 ntBASIC17.5■□□□□ 0.39
CHRNA1P02708 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA1P02708 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms