Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AC063926.3-201ENST00000624734 5658 ntBASIC16.29■□□□□ 0.2
CBX6O95503 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CBX6O95503 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CBX6O95503 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.29■□□□□ 0.2
CBX6O95503 PMS2P2-201ENST00000425039 1128 ntBASIC16.29■□□□□ 0.2
CBX6O95503 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CBX6O95503 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX6O95503 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX6O95503 AC010327.4-202ENST00000591484 748 ntBASIC16.29■□□□□ 0.2
CBX6O95503 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX6O95503 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CBX6O95503 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX6O95503 CICP13-201ENST00000422015 2789 ntBASIC16.29■□□□□ 0.2
CBX6O95503 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX6O95503 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CBX6O95503 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX6O95503 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CBX6O95503 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX6O95503 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 AL353593.2-201ENST00000602529 1483 ntBASIC16.29■□□□□ 0.2
CBX6O95503 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX6O95503 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX6O95503 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX6O95503 AC103564.2-201ENST00000432853 1299 ntBASIC16.28■□□□□ 0.2
CBX6O95503 RPS2P1-201ENST00000434010 821 ntBASIC16.28■□□□□ 0.2
CBX6O95503 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.28■□□□□ 0.2
CBX6O95503 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CBX6O95503 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 AP001160.2-201ENST00000596071 487 ntBASIC16.28■□□□□ 0.2
CBX6O95503 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX6O95503 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CBX6O95503 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX6O95503 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX6O95503 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CBX6O95503 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CBX6O95503 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CBX6O95503 AL021920.2-201ENST00000624828 1351 ntBASIC16.27■□□□□ 0.2
CBX6O95503 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CBX6O95503 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.2
CBX6O95503 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CBX6O95503 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CBX6O95503 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX6O95503 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms