Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UBL3O95164 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.64□□□□□ -0.07
UBL3O95164 POLD2P1-201ENST00000511220 997 ntBASIC14.64□□□□□ -0.07
UBL3O95164 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.64□□□□□ -0.07
UBL3O95164 PDPK2P-202ENST00000562415 1191 ntBASIC14.64□□□□□ -0.07
UBL3O95164 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.64□□□□□ -0.07
UBL3O95164 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.64□□□□□ -0.07
UBL3O95164 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.64□□□□□ -0.07
UBL3O95164 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.64□□□□□ -0.07
UBL3O95164 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
UBL3O95164 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
UBL3O95164 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
UBL3O95164 PMS2P7-201ENST00000506558 1336 ntBASIC14.64□□□□□ -0.07
UBL3O95164 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBL3O95164 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UBL3O95164 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.63□□□□□ -0.07
UBL3O95164 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.63□□□□□ -0.07
UBL3O95164 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 AC002347.1-201ENST00000569543 541 ntBASIC14.63□□□□□ -0.07
UBL3O95164 MIR3909-201ENST00000579518 119 ntBASIC14.63□□□□□ -0.07
UBL3O95164 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 KRT8P39-201ENST00000396270 1433 ntBASIC14.63□□□□□ -0.07
UBL3O95164 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.63□□□□□ -0.07
UBL3O95164 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
UBL3O95164 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBL3O95164 NORAD-201ENST00000565493 5339 ntBASIC14.62□□□□□ -0.07
UBL3O95164 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.62□□□□□ -0.07
UBL3O95164 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UBL3O95164 LINC02228-204ENST00000642115 2962 ntBASIC14.62□□□□□ -0.07
UBL3O95164 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
UBL3O95164 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
UBL3O95164 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
UBL3O95164 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBL3O95164 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UBL3O95164 HMGA1P7-201ENST00000406908 502 ntBASIC14.62□□□□□ -0.07
UBL3O95164 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.62□□□□□ -0.07
UBL3O95164 AP000347.1-202ENST00000435868 847 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms