Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.34■□□□□ 0.21
RFPL1O75677 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RFPL1O75677 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RFPL1O75677 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFPL1O75677 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.34■□□□□ 0.21
RFPL1O75677 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.34■□□□□ 0.21
RFPL1O75677 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.34■□□□□ 0.21
RFPL1O75677 MCCD1P2-201ENST00000423228 335 ntBASIC16.34■□□□□ 0.21
RFPL1O75677 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.34■□□□□ 0.21
RFPL1O75677 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.34■□□□□ 0.21
RFPL1O75677 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFPL1O75677 AC005829.1-201ENST00000570002 483 ntBASIC16.34■□□□□ 0.21
RFPL1O75677 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.34■□□□□ 0.21
RFPL1O75677 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.34■□□□□ 0.21
RFPL1O75677 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.34■□□□□ 0.21
RFPL1O75677 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.34■□□□□ 0.21
RFPL1O75677 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.34■□□□□ 0.21
RFPL1O75677 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RFPL1O75677 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 AC012569.1-201ENST00000591191 1524 ntBASIC16.34■□□□□ 0.21
RFPL1O75677 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.34■□□□□ 0.21
RFPL1O75677 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RFPL1O75677 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFPL1O75677 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFPL1O75677 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFPL1O75677 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
RFPL1O75677 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFPL1O75677 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFPL1O75677 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RFPL1O75677 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFPL1O75677 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.33■□□□□ 0.2
RFPL1O75677 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.33■□□□□ 0.2
RFPL1O75677 IGHV3-65-201ENST00000523210 341 ntBASIC16.33■□□□□ 0.2
RFPL1O75677 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 SNHG9-202ENST00000564014 471 ntBASIC16.33■□□□□ 0.2
RFPL1O75677 OR7E47P-204ENST00000575924 449 ntBASIC16.33■□□□□ 0.2
RFPL1O75677 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 AL596442.2-201ENST00000610240 980 ntBASIC16.33■□□□□ 0.2
RFPL1O75677 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.33■□□□□ 0.2
RFPL1O75677 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFPL1O75677 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
RFPL1O75677 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFPL1O75677 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFPL1O75677 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 CRYGEP-201ENST00000412192 528 ntBASIC16.32■□□□□ 0.2
RFPL1O75677 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms