Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 AC093724.1-201ENST00000448659 1027 ntBASIC13.75□□□□□ -0.21
PDCD6O75340 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.75□□□□□ -0.21
PDCD6O75340 AC092910.1-201ENST00000482027 1129 ntBASIC13.75□□□□□ -0.21
PDCD6O75340 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.75□□□□□ -0.21
PDCD6O75340 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDCD6O75340 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PDCD6O75340 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PDCD6O75340 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
PDCD6O75340 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.74□□□□□ -0.21
PDCD6O75340 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.74□□□□□ -0.21
PDCD6O75340 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.74□□□□□ -0.21
PDCD6O75340 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PDCD6O75340 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.74□□□□□ -0.21
PDCD6O75340 VN2R19P-201ENST00000442399 1052 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 AC245100.5-201ENST00000452108 331 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 KRT18P34-201ENST00000488218 1270 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 KRT18P56-201ENST00000507275 550 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
PDCD6O75340 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.74□□□□□ -0.21
PDCD6O75340 AC109635.5-201ENST00000533593 962 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 AL365330.1-201ENST00000607459 531 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 AC148477.8-201ENST00000624298 468 ntBASIC13.74□□□□□ -0.21
PDCD6O75340 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PDCD6O75340 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDCD6O75340 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.74□□□□□ -0.21
PDCD6O75340 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms