Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
O00370 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
O00370 AC006449.6-201ENST00000612330 2296 ntBASIC17.36■□□□□ 0.37
O00370 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.36■□□□□ 0.37
O00370 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
O00370 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.35■□□□□ 0.37
O00370 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
O00370 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.35■□□□□ 0.37
O00370 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.35■□□□□ 0.37
O00370 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.35■□□□□ 0.37
O00370 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
O00370 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 AL627223.1-201ENST00000416693 442 ntBASIC17.35■□□□□ 0.37
O00370 DNAJB3-202ENST00000449667 1266 ntBASIC17.35■□□□□ 0.37
O00370 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.35■□□□□ 0.37
O00370 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.35■□□□□ 0.37
O00370 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.35■□□□□ 0.37
O00370 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.35■□□□□ 0.37
O00370 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.35■□□□□ 0.37
O00370 SLC25A39P2-201ENST00000537614 270 ntBASIC17.35■□□□□ 0.37
O00370 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
O00370 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
O00370 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.35■□□□□ 0.37
O00370 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
O00370 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.35■□□□□ 0.37
O00370 AC004835.2-201ENST00000603762 682 ntBASIC17.35■□□□□ 0.37
O00370 AC139530.3-201ENST00000620344 690 ntBASIC17.35■□□□□ 0.37
O00370 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
O00370 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
O00370 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.35■□□□□ 0.37
O00370 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
O00370 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
O00370 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
O00370 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 AC010491.1-201ENST00000563101 2797 ntBASIC17.34■□□□□ 0.37
O00370 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.34■□□□□ 0.37
O00370 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.34■□□□□ 0.37
O00370 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
O00370 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.34■□□□□ 0.37
O00370 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.34■□□□□ 0.37
O00370 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.34■□□□□ 0.37
O00370 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 AC005237.2-201ENST00000434368 219 ntBASIC17.34■□□□□ 0.37
O00370 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
O00370 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.34■□□□□ 0.37
O00370 AC098859.1-201ENST00000502915 1238 ntBASIC17.34■□□□□ 0.37
O00370 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.34■□□□□ 0.37
O00370 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
O00370 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
O00370 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.34■□□□□ 0.37
O00370 UXT-AS1-201ENST00000590504 1525 ntBASIC17.34■□□□□ 0.37
O00370 AC024909.3-201ENST00000611513 2257 ntBASIC17.34■□□□□ 0.37
O00370 SPTSSB-204ENST00000617024 1292 ntBASIC17.34■□□□□ 0.37
O00370 AL691403.2-201ENST00000618460 490 ntBASIC17.34■□□□□ 0.37
O00370 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
O00370 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.34■□□□□ 0.37
O00370 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
O00370 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
O00370 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
O00370 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
O00370 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
O00370 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
O00370 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
O00370 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
O00370 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
O00370 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
O00370 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.33■□□□□ 0.37
O00370 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
O00370 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.33■□□□□ 0.36
O00370 FAM58DP-201ENST00000428076 619 ntBASIC17.33■□□□□ 0.36
O00370 CNN2P11-201ENST00000429351 262 ntBASIC17.33■□□□□ 0.36
O00370 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
O00370 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms