Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 INVS-201ENST00000262456 2968 ntTSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 CICP16-201ENST00000502609 2813 ntBASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 GGT1-206ENST00000404223 952 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC073210.2-201ENST00000430369 194 ntBASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PRSS44-201ENST00000515154 1146 ntBASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms