Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 ZACNP1-201ENST00000612259 710 ntBASIC20.05■□□□□ 0.8
RGPD3A6NKT7 AC022748.3-201ENST00000621828 275 ntBASIC20.05■□□□□ 0.8
RGPD3A6NKT7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 AP001282.1-201ENST00000531301 1499 ntBASIC20.04■□□□□ 0.8
RGPD3A6NKT7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 AC098935.1-201ENST00000446057 611 ntBASIC20.04■□□□□ 0.8
RGPD3A6NKT7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RGPD3A6NKT7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 AC008764.6-201ENST00000595909 2069 ntBASIC20.03■□□□□ 0.8
RGPD3A6NKT7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 RPSAP31-201ENST00000416648 895 ntBASIC20.03■□□□□ 0.8
RGPD3A6NKT7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 NOC2LP1-201ENST00000450578 752 ntBASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 CROCCP2-202ENST00000412962 2773 ntBASIC20.03■□□□□ 0.8
RGPD3A6NKT7 AC106794.1-201ENST00000506935 792 ntBASIC20.03■□□□□ 0.8
RGPD3A6NKT7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.03■□□□□ 0.8
RGPD3A6NKT7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 MARK2P5-201ENST00000507649 634 ntBASIC20.02■□□□□ 0.8
RGPD3A6NKT7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RGPD3A6NKT7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms