Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC196A0A1B0GTZ2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC196A0A1B0GTZ2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC196A0A1B0GTZ2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC196A0A1B0GTZ2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AL596257.1-201ENST00000641463 2694 ntBASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 HAUS4P1-201ENST00000406739 1145 ntBASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 SNHG9-202ENST00000564014 471 ntBASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC196A0A1B0GTZ2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 CNN2P11-201ENST00000429351 262 ntBASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 AC093520.2-201ENST00000561830 333 ntBASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC196A0A1B0GTZ2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC196A0A1B0GTZ2 AP3S2-216ENST00000617003 1561 ntBASIC18.89■□□□□ 0.62
CCDC196A0A1B0GTZ2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC196A0A1B0GTZ2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC196A0A1B0GTZ2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 AC023141.5-201ENST00000458585 616 ntBASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 RARRES2P9-201ENST00000565168 469 ntBASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 AC009093.7-201ENST00000623853 1223 ntBASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC196A0A1B0GTZ2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms