Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 SIGLEC16-201ENST00000599858 1437 ntBASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RCL1Q9Y2P8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 INTS4P1-201ENST00000438455 1935 ntBASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 AC104581.4-201ENST00000623126 3052 ntBASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 AC106881.1-201ENST00000605849 3329 ntBASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 RNF152P1-201ENST00000397754 604 ntBASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RCL1Q9Y2P8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 CICP24-201ENST00000605464 2705 ntBASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 AC113347.1-201ENST00000413321 391 ntBASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 AP000867.4-201ENST00000641616 219 ntBASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms