Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.62■□□□□ 0.89
TNNQ9UQP3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 BANF1P1-201ENST00000553684 263 ntBASIC20.62■□□□□ 0.89
TNNQ9UQP3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TNNQ9UQP3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.62■□□□□ 0.89
TNNQ9UQP3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.62■□□□□ 0.89
TNNQ9UQP3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TNNQ9UQP3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TNNQ9UQP3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNQ9UQP3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNQ9UQP3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNQ9UQP3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.6■□□□□ 0.89
TNNQ9UQP3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 RNA5SP410-201ENST00000516285 106 ntBASIC20.6■□□□□ 0.89
TNNQ9UQP3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 AL596442.2-201ENST00000610240 980 ntBASIC20.6■□□□□ 0.89
TNNQ9UQP3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNQ9UQP3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNQ9UQP3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 HCG11-201ENST00000411553 5696 ntBASIC20.59■□□□□ 0.89
TNNQ9UQP3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 HAUS4P1-201ENST00000406739 1145 ntBASIC20.59■□□□□ 0.89
TNNQ9UQP3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 AC211486.1-202ENST00000416371 468 ntBASIC20.59■□□□□ 0.89
TNNQ9UQP3 AC005237.2-201ENST00000434368 219 ntBASIC20.59■□□□□ 0.89
TNNQ9UQP3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 AC211476.1-201ENST00000503899 468 ntBASIC20.59■□□□□ 0.89
TNNQ9UQP3 IGHV3-62-201ENST00000520057 340 ntBASIC20.59■□□□□ 0.89
TNNQ9UQP3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TNNQ9UQP3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNQ9UQP3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms