Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 KRT8P12-202ENST00000472924 1397 ntBASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 AC106886.4-201ENST00000623557 2502 ntBASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB8Q9UN66 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 ZNF890P-202ENST00000530367 1156 ntBASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AC190387.1-201ENST00000551683 408 ntBASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AC079414.2-201ENST00000567157 1104 ntBASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 AC080080.1-201ENST00000625121 2420 ntBASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 NFIC-211ENST00000641145 8399 ntBASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB8Q9UN66 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHB8Q9UN66 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB8Q9UN66 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms