Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 AC017083.2-201ENST00000608069 979 ntBASIC16.3■□□□□ 0.2
MBD1Q9UIS9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 PCGF3-213ENST00000620529 1899 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AL118508.1-201ENST00000613502 2345 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 KRT8P12-202ENST00000472924 1397 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 MIR1909-201ENST00000411312 80 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AC112492.5-201ENST00000421897 457 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AC011495.1-201ENST00000498085 584 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AC061975.2-201ENST00000581722 295 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 SRD5A3P1-201ENST00000603021 949 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AL033527.5-202ENST00000641632 1098 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 AL589702.1-201ENST00000641229 1509 ntBASIC16.29■□□□□ 0.2
MBD1Q9UIS9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MBD1Q9UIS9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 SERBP1P3-201ENST00000459980 809 ntBASIC16.28■□□□□ 0.2
MBD1Q9UIS9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AC004461.2-201ENST00000629517 803 ntBASIC16.28■□□□□ 0.2
MBD1Q9UIS9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms