Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AC141586.5-201ENST00000624546 2050 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
NCDNQ9UBB6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NCDNQ9UBB6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.08■□□□□ 0.17
NCDNQ9UBB6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCDNQ9UBB6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 IGHJ2P-201ENST00000454480 60 ntBASIC16.08■□□□□ 0.16
NCDNQ9UBB6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 AC074044.1-201ENST00000609673 707 ntBASIC16.08■□□□□ 0.16
NCDNQ9UBB6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.08■□□□□ 0.16
NCDNQ9UBB6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCDNQ9UBB6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SPDYE17-201ENST00000412399 783 ntBASIC16.07■□□□□ 0.16
NCDNQ9UBB6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 MIR5189-201ENST00000577370 114 ntBASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AC133539.2-201ENST00000604757 467 ntBASIC16.07■□□□□ 0.16
NCDNQ9UBB6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AC009053.2-201ENST00000563701 2365 ntBASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCDNQ9UBB6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 AC080080.1-201ENST00000625121 2420 ntBASIC16.06■□□□□ 0.16
NCDNQ9UBB6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms