Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 RPS2P1-201ENST00000434010 821 ntBASIC16.06■□□□□ 0.16
MKS1Q9NXB0 FAM210CP-201ENST00000445714 574 ntBASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AF238378.1-201ENST00000526806 358 ntBASIC16.06■□□□□ 0.16
MKS1Q9NXB0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AC091304.2-201ENST00000564639 760 ntBASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKS1Q9NXB0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 TSPY26P-202ENST00000565928 3884 ntBASIC16.05■□□□□ 0.16
MKS1Q9NXB0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.05■□□□□ 0.16
MKS1Q9NXB0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 CXCL1P1-201ENST00000502804 216 ntBASIC16.05■□□□□ 0.16
MKS1Q9NXB0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 AC093458.2-201ENST00000623150 629 ntBASIC16.05■□□□□ 0.16
MKS1Q9NXB0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 LINC01101-201ENST00000622953 1884 ntBASIC16.05■□□□□ 0.16
MKS1Q9NXB0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKS1Q9NXB0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 LINC02228-204ENST00000642115 2962 ntBASIC16.04■□□□□ 0.16
MKS1Q9NXB0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.04■□□□□ 0.16
MKS1Q9NXB0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms