Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PCDH8P1-201ENST00000428983 2773 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PRYP6-201ENST00000514804 343 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AC105233.2-201ENST00000523697 349 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AF228730.5-201ENST00000530288 346 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 GPALPP1-207ENST00000611650 899 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AL691403.2-201ENST00000618460 490 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 AL513210.1-201ENST00000629608 234 ntBASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.62□□□□□ -0.07
PARPBPQ9NWS1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 AC005237.2-201ENST00000434368 219 ntBASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 KRT8P48-201ENST00000515599 1220 ntBASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 AC027307.2-201ENST00000591252 911 ntBASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.61□□□□□ -0.07
PARPBPQ9NWS1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms