Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 RASA4DP-201ENST00000460726 1199 ntBASIC19.37■□□□□ 0.69
RTN4Q9NQC3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 AC112698.1-201ENST00000510299 916 ntBASIC19.37■□□□□ 0.69
RTN4Q9NQC3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4Q9NQC3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 AC097376.2-205ENST00000610159 5334 ntBASIC19.36■□□□□ 0.69
RTN4Q9NQC3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 MTHFR-217ENST00000641820 1569 ntBASIC19.36■□□□□ 0.69
RTN4Q9NQC3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4Q9NQC3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 AC012497.1-201ENST00000429392 575 ntBASIC19.35■□□□□ 0.69
RTN4Q9NQC3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 AL136038.4-201ENST00000603606 1261 ntBASIC19.35■□□□□ 0.69
RTN4Q9NQC3 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.35■□□□□ 0.69
RTN4Q9NQC3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 AL031430.1-201ENST00000642067 1039 ntBASIC19.35■□□□□ 0.69
RTN4Q9NQC3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 AC006504.5-208ENST00000588784 2401 ntBASIC19.35■□□□□ 0.69
RTN4Q9NQC3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RTN4Q9NQC3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms