Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AC245100.5-201ENST00000452108 331 ntBASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 RARRES2P8-201ENST00000566335 367 ntBASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AC002347.1-201ENST00000569543 541 ntBASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AL589702.1-201ENST00000641229 1509 ntBASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC40Q9H9A6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC40Q9H9A6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 315.5 ms