Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
SCAF1Q9H7N4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 PTCHD3P3-201ENST00000403073 906 ntBASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 RBPMS2P1-201ENST00000437762 623 ntBASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 RWDD4P1-201ENST00000488019 565 ntBASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 AL158211.1-201ENST00000566763 763 ntBASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SCAF1Q9H7N4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SCAF1Q9H7N4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC24.45■■□□□ 1.51
SCAF1Q9H7N4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
SCAF1Q9H7N4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 MIR1909-201ENST00000411312 80 ntBASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 CXCL1P1-201ENST00000502804 216 ntBASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 AL022328.3-201ENST00000607943 679 ntBASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 AC110792.4-201ENST00000609843 298 ntBASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCAF1Q9H7N4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 GMCL1P1-201ENST00000463439 1581 ntBASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 VN1R53P-201ENST00000429536 957 ntBASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 AL671277.1-201ENST00000429656 993 ntBASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 GGTLC5P-201ENST00000617623 998 ntBASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms