Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AL592424.1-201ENST00000563624 1536 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 FAM21FP-201ENST00000426241 1131 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC012441.1-201ENST00000446669 685 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 PTP4A1P2-201ENST00000546033 454 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 KRT90P-201ENST00000549264 1064 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC243960.2-201ENST00000600996 747 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ABBA01031663.1-201ENST00000635630 790 ntBASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC134312.5-201ENST00000568031 1313 ntBASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 MIR326-201ENST00000362220 95 ntBASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC8.29□□□□□ -1.08
KRTAP4-1Q9BYQ7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms