Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 KRT18P34-201ENST00000488218 1270 ntBASIC11.4□□□□□ -0.58
UPK3BQ9BT76 HLA-J-203ENST00000494367 1087 ntBASIC11.4□□□□□ -0.58
UPK3BQ9BT76 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK3BQ9BT76 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
UPK3BQ9BT76 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 KRT8P39-201ENST00000396270 1433 ntBASIC11.39□□□□□ -0.59
UPK3BQ9BT76 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AC005237.2-201ENST00000434368 219 ntBASIC11.39□□□□□ -0.59
UPK3BQ9BT76 SPCS2P4-201ENST00000436160 681 ntBASIC11.39□□□□□ -0.59
UPK3BQ9BT76 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AC025678.2-201ENST00000562061 970 ntBASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 AC015911.4-201ENST00000588022 1070 ntBASIC11.39□□□□□ -0.59
UPK3BQ9BT76 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms