Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 AC012645.4-201ENST00000610691 1061 ntBASIC18.89■□□□□ 0.61
SLF1Q9BQI6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLF1Q9BQI6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 AC005034.1-201ENST00000426657 489 ntBASIC18.88■□□□□ 0.61
SLF1Q9BQI6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 AC004233.3-201ENST00000607794 1269 ntBASIC18.88■□□□□ 0.61
SLF1Q9BQI6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 PCGF3-213ENST00000620529 1899 ntBASIC18.88■□□□□ 0.61
SLF1Q9BQI6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.88■□□□□ 0.61
SLF1Q9BQI6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 RNF216P1-203ENST00000404404 2427 ntBASIC18.87■□□□□ 0.61
SLF1Q9BQI6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.87■□□□□ 0.61
SLF1Q9BQI6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 AL035252.4-201ENST00000624174 288 ntBASIC18.87■□□□□ 0.61
SLF1Q9BQI6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SLF1Q9BQI6 DOC2GP-204ENST00000639052 2548 ntBASIC18.87■□□□□ 0.61
SLF1Q9BQI6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 AL139384.1-201ENST00000612143 3047 ntBASIC18.86■□□□□ 0.61
SLF1Q9BQI6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms