Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 AC004461.1-201ENST00000412461 403 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 AGGF1P2-201ENST00000426656 2106 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 AL353729.2-201ENST00000605859 1249 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 AC099522.2-201ENST00000607001 744 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 AL137246.1-201ENST00000607072 977 ntBASIC14.64□□□□□ -0.07
USB1Q9BQ65 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
USB1Q9BQ65 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
USB1Q9BQ65 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 SLC22A20-204ENST00000530038 1673 ntBASIC14.63□□□□□ -0.07
USB1Q9BQ65 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 TIMM8BP1-201ENST00000452384 211 ntBASIC14.63□□□□□ -0.07
USB1Q9BQ65 AC023141.5-201ENST00000458585 616 ntBASIC14.63□□□□□ -0.07
USB1Q9BQ65 IGHV3-62-201ENST00000520057 340 ntBASIC14.63□□□□□ -0.07
USB1Q9BQ65 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 CYP2A7P1-201ENST00000595391 815 ntBASIC14.63□□□□□ -0.07
USB1Q9BQ65 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 AL139011.1-202ENST00000642063 584 ntBASIC14.63□□□□□ -0.07
USB1Q9BQ65 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms