Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC104640.1-201ENST00000562617 2109 ntBASIC14.46□□□□□ -0.09
VRK1Q99986 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK1Q99986 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VRK1Q99986 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK1Q99986 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
VRK1Q99986 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VRK1Q99986 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VRK1Q99986 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.46□□□□□ -0.1
VRK1Q99986 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.46□□□□□ -0.1
VRK1Q99986 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VRK1Q99986 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.46□□□□□ -0.1
VRK1Q99986 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.46□□□□□ -0.1
VRK1Q99986 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK1Q99986 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VRK1Q99986 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.45□□□□□ -0.1
VRK1Q99986 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VRK1Q99986 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.45□□□□□ -0.1
VRK1Q99986 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.45□□□□□ -0.1
VRK1Q99986 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK1Q99986 ACTG1P14-201ENST00000446382 1122 ntBASIC14.45□□□□□ -0.1
VRK1Q99986 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.45□□□□□ -0.1
VRK1Q99986 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VRK1Q99986 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.45□□□□□ -0.1
VRK1Q99986 AC112191.1-201ENST00000523689 701 ntBASIC14.45□□□□□ -0.1
VRK1Q99986 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
VRK1Q99986 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.45□□□□□ -0.1
VRK1Q99986 AL031432.2-201ENST00000566714 459 ntBASIC14.45□□□□□ -0.1
VRK1Q99986 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK1Q99986 AL928711.1-201ENST00000570165 459 ntBASIC14.45□□□□□ -0.1
VRK1Q99986 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VRK1Q99986 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK1Q99986 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK1Q99986 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK1Q99986 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 KRT18P28-201ENST00000453838 1332 ntBASIC14.44□□□□□ -0.1
VRK1Q99986 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK1Q99986 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK1Q99986 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK1Q99986 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK1Q99986 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK1Q99986 METTL21AP1-201ENST00000438852 635 ntBASIC14.44□□□□□ -0.1
VRK1Q99986 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK1Q99986 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK1Q99986 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
VRK1Q99986 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms