Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 IGHV3-62-201ENST00000520057 340 ntBASIC19.24■□□□□ 0.67
NEK1Q96PY6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 KRT8P23-201ENST00000560090 1207 ntBASIC19.24■□□□□ 0.67
NEK1Q96PY6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 PAUPAR-201ENST00000630360 2965 ntBASIC19.24■□□□□ 0.67
NEK1Q96PY6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEK1Q96PY6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.24■□□□□ 0.67
NEK1Q96PY6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AC112482.1-201ENST00000492080 688 ntBASIC19.23■□□□□ 0.67
NEK1Q96PY6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 YBX1P5-201ENST00000509441 847 ntBASIC19.23■□□□□ 0.67
NEK1Q96PY6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AC061975.2-201ENST00000581722 295 ntBASIC19.23■□□□□ 0.67
NEK1Q96PY6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 AC105339.1-204ENST00000636249 355 ntBASIC19.23■□□□□ 0.67
NEK1Q96PY6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.23■□□□□ 0.67
NEK1Q96PY6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEK1Q96PY6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms