Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PGBD1Q96JS3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 RN7SL589P-201ENST00000481268 310 ntBASIC18.9■□□□□ 0.62
PGBD1Q96JS3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 LINC01225-203ENST00000563550 1244 ntBASIC18.9■□□□□ 0.62
PGBD1Q96JS3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 AC004835.2-201ENST00000603762 682 ntBASIC18.9■□□□□ 0.62
PGBD1Q96JS3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 AC079781.4-201ENST00000641908 219 ntBASIC18.9■□□□□ 0.62
PGBD1Q96JS3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PGBD1Q96JS3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PGBD1Q96JS3 AC103702.1-201ENST00000548801 2630 ntBASIC18.89■□□□□ 0.62
PGBD1Q96JS3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 AL139400.1-201ENST00000366220 510 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 AL627223.1-201ENST00000416693 442 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 AC005237.2-201ENST00000434368 219 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 KRT18P34-201ENST00000488218 1270 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 AC027307.2-201ENST00000591252 911 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 AP005117.1-202ENST00000581724 1908 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 LINC02447-202ENST00000501888 2146 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 UXT-AS1-201ENST00000590504 1525 ntBASIC18.89■□□□□ 0.61
PGBD1Q96JS3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PGBD1Q96JS3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.88■□□□□ 0.61
PGBD1Q96JS3 METTL21AP1-201ENST00000438852 635 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms