Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 AL365330.1-201ENST00000607459 531 ntBASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS3Q8IXF0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 RARRES2P5-201ENST00000564013 466 ntBASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 MIR8072-201ENST00000614241 80 ntBASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NPAS3Q8IXF0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CDC14C-201ENST00000428251 1719 ntBASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 LINC01144-201ENST00000626198 1710 ntBASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 AC119751.2-201ENST00000504529 210 ntBASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 MIR4259-201ENST00000584466 101 ntBASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CLK3P2-201ENST00000427566 1453 ntBASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS3Q8IXF0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 AD000864.1-201ENST00000624076 2295 ntBASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 GGT3P-204ENST00000453783 1664 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms