Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AHCYP2-201ENST00000430630 1300 ntBASIC20.1■□□□□ 0.81
COL23A1Q86Y22 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 RPSAP36-202ENST00000494591 1261 ntBASIC20.1■□□□□ 0.81
COL23A1Q86Y22 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AC104982.3-201ENST00000581995 514 ntBASIC20.1■□□□□ 0.81
COL23A1Q86Y22 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 KRT8P19-201ENST00000551916 1455 ntBASIC20.1■□□□□ 0.81
COL23A1Q86Y22 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 AC067852.2-201ENST00000590513 2313 ntBASIC20.09■□□□□ 0.81
COL23A1Q86Y22 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL23A1Q86Y22 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 MIR5572-201ENST00000583188 137 ntBASIC20.08■□□□□ 0.81
COL23A1Q86Y22 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 AC020914.3-201ENST00000594712 304 ntBASIC20.08■□□□□ 0.81
COL23A1Q86Y22 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.08■□□□□ 0.81
COL23A1Q86Y22 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL23A1Q86Y22 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL23A1Q86Y22 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL23A1Q86Y22 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL23A1Q86Y22 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL23A1Q86Y22 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.08■□□□□ 0.8
COL23A1Q86Y22 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.07■□□□□ 0.8
COL23A1Q86Y22 LDHBP1-201ENST00000455730 1119 ntBASIC20.07■□□□□ 0.8
COL23A1Q86Y22 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.07■□□□□ 0.8
COL23A1Q86Y22 MIR3619-201ENST00000579667 83 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms