Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 AC245100.5-201ENST00000452108 331 ntBASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 AL662844.4-201ENST00000606367 2838 ntBASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 AC092364.2-201ENST00000596710 2692 ntBASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 AC012645.4-201ENST00000610691 1061 ntBASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 AC004461.2-201ENST00000629517 803 ntBASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBE3BQ7Z3V4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 SDHAP3-202ENST00000515467 728 ntBASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 AC025048.6-201ENST00000634326 1161 ntBASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 AC007541.1-201ENST00000570282 1469 ntBASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBE3BQ7Z3V4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBE3BQ7Z3V4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBE3BQ7Z3V4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms