Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 DUSP5P1-201ENST00000441325 1139 ntBASIC16.44■□□□□ 0.22
RAPH1Q70E73 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 RNPS1P1-201ENST00000507437 918 ntBASIC16.44■□□□□ 0.22
RAPH1Q70E73 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 CLEC4GP1-201ENST00000596555 870 ntBASIC16.44■□□□□ 0.22
RAPH1Q70E73 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 AC012569.1-201ENST00000591191 1524 ntBASIC16.44■□□□□ 0.22
RAPH1Q70E73 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAPH1Q70E73 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAPH1Q70E73 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 IGHV3-65-201ENST00000523210 341 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 AL356488.2-201ENST00000602755 427 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC010654.1-201ENST00000615722 808 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC008735.5-201ENST00000623544 497 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC005593.1-201ENST00000624894 515 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAPH1Q70E73 PRAL-201ENST00000624952 3286 ntBASIC16.43■□□□□ 0.22
RAPH1Q70E73 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
RAPH1Q70E73 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 MRPL20P1-201ENST00000400819 433 ntBASIC16.42■□□□□ 0.22
RAPH1Q70E73 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.42■□□□□ 0.22
RAPH1Q70E73 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 AC105339.3-201ENST00000560043 636 ntBASIC16.42■□□□□ 0.22
RAPH1Q70E73 PGM5P2-202ENST00000637225 1043 ntBASIC16.42■□□□□ 0.22
RAPH1Q70E73 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms