Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 DUX4L27-201ENST00000554796 1261 ntBASIC17.33■□□□□ 0.36
VSTM1Q6UX27 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 AL365203.3-201ENST00000609742 2057 ntBASIC17.33■□□□□ 0.36
VSTM1Q6UX27 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 LINC01144-201ENST00000626198 1710 ntBASIC17.33■□□□□ 0.36
VSTM1Q6UX27 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSTM1Q6UX27 GGT3P-204ENST00000453783 1664 ntBASIC17.32■□□□□ 0.36
VSTM1Q6UX27 AL513477.1-201ENST00000602865 2407 ntBASIC17.32■□□□□ 0.36
VSTM1Q6UX27 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 MIR4453-201ENST00000584019 89 ntBASIC17.32■□□□□ 0.36
VSTM1Q6UX27 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 AC007967.4-201ENST00000614700 386 ntBASIC17.32■□□□□ 0.36
VSTM1Q6UX27 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSTM1Q6UX27 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 HYMAI-201ENST00000635591 3347 ntBASIC17.31■□□□□ 0.36
VSTM1Q6UX27 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 AC005498.2-205ENST00000593218 784 ntBASIC17.31■□□□□ 0.36
VSTM1Q6UX27 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms