Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 HMGA1P7-201ENST00000406908 502 ntBASIC14.86□□□□□ -0.03
NIPAL3Q6P499 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 AP000347.1-202ENST00000435868 847 ntBASIC14.86□□□□□ -0.03
NIPAL3Q6P499 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.85□□□□□ -0.03
NIPAL3Q6P499 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 AC112504.1-201ENST00000623415 1841 ntBASIC14.85□□□□□ -0.03
NIPAL3Q6P499 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.85□□□□□ -0.03
NIPAL3Q6P499 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 KRT19P2-202ENST00000557173 1012 ntBASIC14.85□□□□□ -0.03
NIPAL3Q6P499 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NIPAL3Q6P499 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.84□□□□□ -0.03
NIPAL3Q6P499 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms