Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 YBX1P5-201ENST00000509441 847 ntBASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 AC105339.1-204ENST00000636249 355 ntBASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CREB3L3Q68CJ9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AL592309.1-201ENST00000443127 649 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 DNAJB3-201ENST00000446806 729 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC112482.1-201ENST00000492080 688 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 KRT8P23-201ENST00000560090 1207 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 MIR4469-201ENST00000583919 79 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC022145.2-201ENST00000598203 171 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC084121.4-201ENST00000641598 221 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AF228730.8-201ENST00000642140 221 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 AC105917.1-201ENST00000506637 2539 ntBASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CREB3L3Q68CJ9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 FAM220BP-201ENST00000377689 816 ntBASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 IGHV3-62-201ENST00000520057 340 ntBASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 SLC25A39P2-201ENST00000537614 270 ntBASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 AC010327.4-202ENST00000591484 748 ntBASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms