Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 AGAP7P-201ENST00000582299 2062 ntBASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 AGAP14-201ENST00000624701 2060 ntBASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC6LQ2NKX8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 LIN28AP1-201ENST00000429574 405 ntBASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 MIR4492-201ENST00000581627 80 ntBASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 TERC-201ENST00000602385 541 ntBASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 Z83836.1-201ENST00000624605 1642 ntBASIC17.29■□□□□ 0.36
ERCC6LQ2NKX8 AC105250.1-201ENST00000509378 2057 ntBASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 AC008677.1-201ENST00000519230 1561 ntBASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 SLC25A3P1-201ENST00000443844 931 ntBASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 ATP5G1P1-201ENST00000448724 379 ntBASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 RNF126P1-202ENST00000569893 925 ntBASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC6LQ2NKX8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms