Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 BX842568.4-201ENST00000421222 227 ntBASIC14.34□□□□□ -0.11
HIST3H3Q16695 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AL592309.1-201ENST00000443127 649 ntBASIC14.34□□□□□ -0.11
HIST3H3Q16695 AC112482.1-201ENST00000492080 688 ntBASIC14.34□□□□□ -0.11
HIST3H3Q16695 IGHV3-62-201ENST00000520057 340 ntBASIC14.34□□□□□ -0.11
HIST3H3Q16695 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 MIR4469-201ENST00000583919 79 ntBASIC14.34□□□□□ -0.11
HIST3H3Q16695 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST3H3Q16695 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HIST3H3Q16695 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
HIST3H3Q16695 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST3H3Q16695 AC011477.6-201ENST00000604980 1927 ntBASIC14.33□□□□□ -0.11
HIST3H3Q16695 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 AP001282.1-201ENST00000531301 1499 ntBASIC14.33□□□□□ -0.12
HIST3H3Q16695 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 UPF3AP3-201ENST00000420996 769 ntBASIC14.33□□□□□ -0.12
HIST3H3Q16695 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 MIR3687-2-201ENST00000577708 61 ntBASIC14.33□□□□□ -0.12
HIST3H3Q16695 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 MIR3687-1-201ENST00000614492 61 ntBASIC14.33□□□□□ -0.12
HIST3H3Q16695 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST3H3Q16695 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST3H3Q16695 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 HLA-H-201ENST00000383620 1096 ntBASIC14.32□□□□□ -0.12
HIST3H3Q16695 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST3H3Q16695 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST3H3Q16695 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms