Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 AC006504.4-201ENST00000592118 1568 ntBASIC12.55□□□□□ -0.4
HIST1H1AQ02539 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H1AQ02539 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PAWRP1-201ENST00000451083 565 ntBASIC12.54□□□□□ -0.4
HIST1H1AQ02539 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AL805961.1-202ENST00000641562 540 ntBASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AC006058.4-201ENST00000624016 1670 ntBASIC12.54□□□□□ -0.4
HIST1H1AQ02539 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AC002310.6-201ENST00000624451 1377 ntBASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 PCDHA3-202ENST00000532566 4594 ntBASIC12.54□□□□□ -0.4
HIST1H1AQ02539 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1AQ02539 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1AQ02539 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms