Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
AP3S2P59780 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 SPDYE15P-201ENST00000424157 909 ntBASIC14.03□□□□□ -0.16
AP3S2P59780 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.03□□□□□ -0.16
AP3S2P59780 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
AP3S2P59780 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 AC020765.3-201ENST00000613051 740 ntBASIC14.03□□□□□ -0.16
AP3S2P59780 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AP3S2P59780 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AP3S2P59780 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S2P59780 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S2P59780 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S2P59780 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.02□□□□□ -0.16
AP3S2P59780 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.02□□□□□ -0.16
AP3S2P59780 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.02□□□□□ -0.16
AP3S2P59780 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
AP3S2P59780 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.02□□□□□ -0.16
AP3S2P59780 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AP3S2P59780 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.02□□□□□ -0.16
AP3S2P59780 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.02□□□□□ -0.16
AP3S2P59780 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S2P59780 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.02□□□□□ -0.17
AP3S2P59780 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 AL020989.1-201ENST00000422979 469 ntBASIC14.02□□□□□ -0.17
AP3S2P59780 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.02□□□□□ -0.17
AP3S2P59780 AC090192.1-201ENST00000517740 490 ntBASIC14.02□□□□□ -0.17
AP3S2P59780 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.02□□□□□ -0.17
AP3S2P59780 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 AL353801.3-201ENST00000609898 542 ntBASIC14.02□□□□□ -0.17
AP3S2P59780 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
AP3S2P59780 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 ITM2C-210ENST00000620962 501 ntBASIC14.02□□□□□ -0.17
AP3S2P59780 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.02□□□□□ -0.17
AP3S2P59780 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
AP3S2P59780 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms