Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AL591122.2-201ENST00000624125 1853 ntBASIC12.25□□□□□ -0.45
HIST1H2BDP58876 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 PNMA6B-201ENST00000538162 1200 ntBASIC12.25□□□□□ -0.45
HIST1H2BDP58876 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 HLA-B-256ENST00000639848 1089 ntBASIC12.25□□□□□ -0.45
HIST1H2BDP58876 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 KRT8P44-201ENST00000441609 1350 ntBASIC12.25□□□□□ -0.45
HIST1H2BDP58876 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 AC126365.1-201ENST00000578585 1514 ntBASIC12.25□□□□□ -0.45
HIST1H2BDP58876 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 AC015909.5-201ENST00000624336 2266 ntBASIC12.25□□□□□ -0.45
HIST1H2BDP58876 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H2BDP58876 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 DUSP5P2-201ENST00000426873 1033 ntBASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 CICP16-201ENST00000502609 2813 ntBASIC12.24□□□□□ -0.45
HIST1H2BDP58876 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AC097359.2-201ENST00000604992 2389 ntBASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AL135999.2-201ENST00000622438 1686 ntBASIC12.24□□□□□ -0.45
HIST1H2BDP58876 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AL512652.2-201ENST00000625156 1716 ntBASIC12.24□□□□□ -0.45
HIST1H2BDP58876 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.24□□□□□ -0.45
HIST1H2BDP58876 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H2BDP58876 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BDP58876 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BDP58876 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
HIST1H2BDP58876 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BDP58876 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BDP58876 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BDP58876 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms