Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TUBB8P7-204ENST00000567960 1332 ntBASIC15.57■□□□□ 0.08
CLDN6P56747 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN6P56747 AL512652.2-201ENST00000625156 1716 ntBASIC15.57■□□□□ 0.08
CLDN6P56747 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CLDN6P56747 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN6P56747 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN6P56747 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN6P56747 FAM8A2P-201ENST00000528813 1142 ntBASIC15.56■□□□□ 0.08
CLDN6P56747 AP005482.1-201ENST00000563722 1273 ntBASIC15.56■□□□□ 0.08
CLDN6P56747 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.56■□□□□ 0.08
CLDN6P56747 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN6P56747 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN6P56747 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN6P56747 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN6P56747 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN6P56747 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CLDN6P56747 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN6P56747 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLDN6P56747 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN6P56747 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN6P56747 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN6P56747 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN6P56747 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN6P56747 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
CLDN6P56747 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN6P56747 SPDYE17-201ENST00000412399 783 ntBASIC15.55■□□□□ 0.08
CLDN6P56747 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN6P56747 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN6P56747 AC104989.1-201ENST00000519711 778 ntBASIC15.55■□□□□ 0.08
CLDN6P56747 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN6P56747 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN6P56747 AC010319.3-201ENST00000597028 470 ntBASIC15.55■□□□□ 0.08
CLDN6P56747 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN6P56747 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN6P56747 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CLDN6P56747 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 AC009053.2-201ENST00000563701 2365 ntBASIC15.55■□□□□ 0.08
CLDN6P56747 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CLDN6P56747 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN6P56747 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 AC080080.1-201ENST00000625121 2420 ntBASIC15.54■□□□□ 0.08
CLDN6P56747 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms