Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.03■□□□□ 0.16
GTF2A1P52655 DUTP2-201ENST00000519164 463 ntBASIC16.03■□□□□ 0.16
GTF2A1P52655 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.03■□□□□ 0.16
GTF2A1P52655 AF186192.3-201ENST00000583427 947 ntBASIC16.03■□□□□ 0.16
GTF2A1P52655 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.03■□□□□ 0.16
GTF2A1P52655 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GTF2A1P52655 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GTF2A1P52655 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GTF2A1P52655 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GTF2A1P52655 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
GTF2A1P52655 DMBT1P1-203ENST00000636837 4628 ntBASIC16.03■□□□□ 0.16
GTF2A1P52655 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GTF2A1P52655 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GTF2A1P52655 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.03■□□□□ 0.16
GTF2A1P52655 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.03■□□□□ 0.16
GTF2A1P52655 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.03■□□□□ 0.16
GTF2A1P52655 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GTF2A1P52655 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.03■□□□□ 0.16
GTF2A1P52655 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GTF2A1P52655 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GTF2A1P52655 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.02■□□□□ 0.16
GTF2A1P52655 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.02■□□□□ 0.16
GTF2A1P52655 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 AC091951.1-201ENST00000512854 2465 ntBASIC16.02■□□□□ 0.16
GTF2A1P52655 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
GTF2A1P52655 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GTF2A1P52655 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.02■□□□□ 0.16
GTF2A1P52655 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.02■□□□□ 0.16
GTF2A1P52655 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GTF2A1P52655 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GTF2A1P52655 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.02■□□□□ 0.16
GTF2A1P52655 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GTF2A1P52655 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 AC073195.1-201ENST00000607241 877 ntBASIC16.02■□□□□ 0.16
GTF2A1P52655 AC073648.6-201ENST00000641589 218 ntBASIC16.02■□□□□ 0.16
GTF2A1P52655 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GTF2A1P52655 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GTF2A1P52655 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.02■□□□□ 0.15
GTF2A1P52655 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.02■□□□□ 0.15
GTF2A1P52655 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.02■□□□□ 0.15
GTF2A1P52655 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
GTF2A1P52655 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GTF2A1P52655 NUTM2HP-201ENST00000442076 2498 ntBASIC16.02■□□□□ 0.15
GTF2A1P52655 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.02■□□□□ 0.15
GTF2A1P52655 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 AC020658.6-201ENST00000623564 1870 ntBASIC16.01■□□□□ 0.15
GTF2A1P52655 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
GTF2A1P52655 AC089987.1-201ENST00000551654 2209 ntBASIC16.01■□□□□ 0.15
GTF2A1P52655 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 HLA-L-209ENST00000420110 1011 ntBASIC16.01■□□□□ 0.15
GTF2A1P52655 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 AC124947.2-201ENST00000547118 1133 ntBASIC16.01■□□□□ 0.15
GTF2A1P52655 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
GTF2A1P52655 MIR3180-5-201ENST00000583743 153 ntBASIC16.01■□□□□ 0.15
GTF2A1P52655 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 FSCN1P1-201ENST00000568912 1481 ntBASIC16.01■□□□□ 0.15
GTF2A1P52655 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms