Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6BP35913 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PDE6BP35913 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.84■□□□□ 0.77
PDE6BP35913 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.84■□□□□ 0.77
PDE6BP35913 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.84■□□□□ 0.77
PDE6BP35913 BAATP1-201ENST00000412284 1225 ntBASIC19.84■□□□□ 0.77
PDE6BP35913 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.84■□□□□ 0.77
PDE6BP35913 AC016694.1-201ENST00000434179 700 ntBASIC19.84■□□□□ 0.77
PDE6BP35913 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.84■□□□□ 0.77
PDE6BP35913 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.84■□□□□ 0.77
PDE6BP35913 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.84■□□□□ 0.77
PDE6BP35913 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PDE6BP35913 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.84■□□□□ 0.77
PDE6BP35913 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.84■□□□□ 0.77
PDE6BP35913 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.84■□□□□ 0.77
PDE6BP35913 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PDE6BP35913 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6BP35913 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 AC004945.1-201ENST00000416738 983 ntBASIC19.83■□□□□ 0.77
PDE6BP35913 FTH1P14-201ENST00000482930 551 ntBASIC19.83■□□□□ 0.77
PDE6BP35913 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.83■□□□□ 0.77
PDE6BP35913 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 MIR3615-201ENST00000581999 87 ntBASIC19.83■□□□□ 0.77
PDE6BP35913 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6BP35913 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6BP35913 AL139099.5-201ENST00000635274 300 ntBASIC19.83■□□□□ 0.77
PDE6BP35913 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.83■□□□□ 0.76
PDE6BP35913 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PDE6BP35913 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.83■□□□□ 0.76
PDE6BP35913 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.83■□□□□ 0.76
PDE6BP35913 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDE6BP35913 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PDE6BP35913 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6BP35913 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PDE6BP35913 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 C1QBPP1-201ENST00000400117 770 ntBASIC19.82■□□□□ 0.76
PDE6BP35913 MIR1247-201ENST00000408206 136 ntBASIC19.82■□□□□ 0.76
PDE6BP35913 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6BP35913 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms