Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TM4SF1P30408 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.91■□□□□ 0.78
TM4SF1P30408 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TM4SF1P30408 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TM4SF1P30408 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 ACKR1-201ENST00000368121 1240 ntBASIC19.91■□□□□ 0.78
TM4SF1P30408 ELK2AP-201ENST00000392510 1007 ntBASIC19.91■□□□□ 0.78
TM4SF1P30408 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TM4SF1P30408 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.91■□□□□ 0.78
TM4SF1P30408 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.91■□□□□ 0.78
TM4SF1P30408 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF1P30408 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF1P30408 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF1P30408 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF1P30408 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF1P30408 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.91■□□□□ 0.78
TM4SF1P30408 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.91■□□□□ 0.78
TM4SF1P30408 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF1P30408 MIR326-201ENST00000362220 95 ntBASIC19.9■□□□□ 0.78
TM4SF1P30408 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.9■□□□□ 0.78
TM4SF1P30408 AC092506.1-202ENST00000401022 528 ntBASIC19.9■□□□□ 0.78
TM4SF1P30408 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF1P30408 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TM4SF1P30408 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF1P30408 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.9■□□□□ 0.78
TM4SF1P30408 AC000095.1-201ENST00000603208 874 ntBASIC19.9■□□□□ 0.78
TM4SF1P30408 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.9■□□□□ 0.78
TM4SF1P30408 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF1P30408 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TM4SF1P30408 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TM4SF1P30408 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF1P30408 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TM4SF1P30408 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF1P30408 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
TM4SF1P30408 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.89■□□□□ 0.77
TM4SF1P30408 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
TM4SF1P30408 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.89■□□□□ 0.77
TM4SF1P30408 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF1P30408 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF1P30408 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF1P30408 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.89■□□□□ 0.77
TM4SF1P30408 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF1P30408 POU5F1P6-201ENST00000466990 990 ntBASIC19.89■□□□□ 0.77
TM4SF1P30408 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.89■□□□□ 0.77
TM4SF1P30408 AC022137.2-201ENST00000503482 481 ntBASIC19.89■□□□□ 0.77
TM4SF1P30408 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF1P30408 SLED1-202ENST00000512051 380 ntBASIC19.89■□□□□ 0.77
TM4SF1P30408 RNA5SP423-201ENST00000517127 109 ntBASIC19.89■□□□□ 0.77
TM4SF1P30408 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.89■□□□□ 0.77
TM4SF1P30408 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.89■□□□□ 0.77
TM4SF1P30408 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF1P30408 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
TM4SF1P30408 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 HLA-A-202ENST00000376806 1854 ntBASIC19.88■□□□□ 0.77
TM4SF1P30408 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF1P30408 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF1P30408 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.88■□□□□ 0.77
TM4SF1P30408 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms