Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
NTF3P20783 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.46□□□□□ -0.42
NTF3P20783 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
NTF3P20783 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NTF3P20783 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
NTF3P20783 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NTF3P20783 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 MMP23A-201ENST00000234610 1017 ntBASIC12.45□□□□□ -0.42
NTF3P20783 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.45□□□□□ -0.42
NTF3P20783 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.45□□□□□ -0.42
NTF3P20783 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 HLA-J-202ENST00000469281 1241 ntBASIC12.45□□□□□ -0.42
NTF3P20783 STK19B-204ENST00000512515 211 ntBASIC12.45□□□□□ -0.42
NTF3P20783 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.45□□□□□ -0.42
NTF3P20783 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 AL031432.5-201ENST00000641059 760 ntBASIC12.45□□□□□ -0.42
NTF3P20783 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NTF3P20783 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.45□□□□□ -0.42
NTF3P20783 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NTF3P20783 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NTF3P20783 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.44□□□□□ -0.42
NTF3P20783 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.44□□□□□ -0.42
NTF3P20783 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 AC009336.1-201ENST00000608941 1553 ntBASIC12.44□□□□□ -0.42
NTF3P20783 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NTF3P20783 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.44□□□□□ -0.42
NTF3P20783 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.44□□□□□ -0.42
NTF3P20783 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.44□□□□□ -0.42
NTF3P20783 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NTF3P20783 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms