Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SCG2P13521 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG2P13521 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG2P13521 AC008677.1-201ENST00000519230 1561 ntBASIC18.68■□□□□ 0.58
SCG2P13521 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG2P13521 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG2P13521 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG2P13521 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG2P13521 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SCG2P13521 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.67■□□□□ 0.58
SCG2P13521 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.67■□□□□ 0.58
SCG2P13521 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 AL353705.2-201ENST00000428243 662 ntBASIC18.67■□□□□ 0.58
SCG2P13521 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.67■□□□□ 0.58
SCG2P13521 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.67■□□□□ 0.58
SCG2P13521 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.67■□□□□ 0.58
SCG2P13521 BANF1P1-201ENST00000553684 263 ntBASIC18.67■□□□□ 0.58
SCG2P13521 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.67■□□□□ 0.58
SCG2P13521 AC004449.1-201ENST00000564240 433 ntBASIC18.67■□□□□ 0.58
SCG2P13521 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.67■□□□□ 0.58
SCG2P13521 MIR4453-201ENST00000584019 89 ntBASIC18.67■□□□□ 0.58
SCG2P13521 AC003101.2-201ENST00000612557 442 ntBASIC18.67■□□□□ 0.58
SCG2P13521 AC007967.4-201ENST00000614700 386 ntBASIC18.67■□□□□ 0.58
SCG2P13521 Z92544.3-201ENST00000624747 417 ntBASIC18.67■□□□□ 0.58
SCG2P13521 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG2P13521 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 AL603832.2-201ENST00000566195 2125 ntBASIC18.67■□□□□ 0.58
SCG2P13521 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.67■□□□□ 0.58
SCG2P13521 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG2P13521 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 AC024909.3-201ENST00000611513 2257 ntBASIC18.66■□□□□ 0.58
SCG2P13521 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.66■□□□□ 0.58
SCG2P13521 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.66■□□□□ 0.58
SCG2P13521 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.66■□□□□ 0.58
SCG2P13521 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG2P13521 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG2P13521 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG2P13521 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG2P13521 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.66■□□□□ 0.58
SCG2P13521 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.66■□□□□ 0.58
SCG2P13521 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCG2P13521 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.66■□□□□ 0.58
SCG2P13521 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SCG2P13521 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG2P13521 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms