Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 FO393414.2-201ENST00000405153 598 ntBASIC18.14■□□□□ 0.49
RARBP10826 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 KRT43P-201ENST00000434019 910 ntBASIC18.14■□□□□ 0.49
RARBP10826 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.14■□□□□ 0.49
RARBP10826 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.14■□□□□ 0.49
RARBP10826 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 AC092552.1-201ENST00000547243 906 ntBASIC18.14■□□□□ 0.49
RARBP10826 SNX29P1-201ENST00000548357 1007 ntBASIC18.14■□□□□ 0.49
RARBP10826 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RARBP10826 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 CDC14C-201ENST00000428251 1719 ntBASIC18.14■□□□□ 0.49
RARBP10826 AL645728.1-201ENST00000366221 2101 ntBASIC18.14■□□□□ 0.49
RARBP10826 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.14■□□□□ 0.49
RARBP10826 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RARBP10826 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.13■□□□□ 0.49
RARBP10826 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.13■□□□□ 0.49
RARBP10826 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.13■□□□□ 0.49
RARBP10826 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.13■□□□□ 0.49
RARBP10826 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.13■□□□□ 0.49
RARBP10826 AC104989.1-201ENST00000519711 778 ntBASIC18.13■□□□□ 0.49
RARBP10826 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.13■□□□□ 0.49
RARBP10826 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
RARBP10826 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.13■□□□□ 0.49
RARBP10826 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RARBP10826 REXO1L6P-201ENST00000603433 1515 ntBASIC18.13■□□□□ 0.49
RARBP10826 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RARBP10826 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RARBP10826 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 CROCCP4-201ENST00000457096 498 ntBASIC18.12■□□□□ 0.49
RARBP10826 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RARBP10826 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.12■□□□□ 0.49
RARBP10826 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.12■□□□□ 0.49
RARBP10826 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.12■□□□□ 0.49
RARBP10826 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.12■□□□□ 0.49
RARBP10826 AC010319.3-201ENST00000597028 470 ntBASIC18.12■□□□□ 0.49
RARBP10826 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.12■□□□□ 0.49
RARBP10826 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RARBP10826 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 GGT4P-201ENST00000623672 1708 ntBASIC18.12■□□□□ 0.49
RARBP10826 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.12■□□□□ 0.49
RARBP10826 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RARBP10826 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RARBP10826 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RARBP10826 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARBP10826 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARBP10826 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RARBP10826 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.11■□□□□ 0.49
RARBP10826 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RARBP10826 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RARBP10826 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.11■□□□□ 0.49
RARBP10826 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms