Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 AC005622.1-201ENST00000636801 1703 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
UBCP0CG48 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.34□□□□□ -0.11
UBCP0CG48 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.34□□□□□ -0.11
UBCP0CG48 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.34□□□□□ -0.11
UBCP0CG48 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.34□□□□□ -0.11
UBCP0CG48 AL356488.2-201ENST00000602755 427 ntBASIC14.34□□□□□ -0.11
UBCP0CG48 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 AC005593.1-201ENST00000624894 515 ntBASIC14.34□□□□□ -0.11
UBCP0CG48 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBCP0CG48 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBCP0CG48 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.34□□□□□ -0.11
UBCP0CG48 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBCP0CG48 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBCP0CG48 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBCP0CG48 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.33□□□□□ -0.11
UBCP0CG48 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.33□□□□□ -0.11
UBCP0CG48 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.33□□□□□ -0.12
UBCP0CG48 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.33□□□□□ -0.12
UBCP0CG48 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.33□□□□□ -0.12
UBCP0CG48 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
UBCP0CG48 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.33□□□□□ -0.12
UBCP0CG48 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.33□□□□□ -0.12
UBCP0CG48 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.33□□□□□ -0.12
UBCP0CG48 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.33□□□□□ -0.12
UBCP0CG48 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.33□□□□□ -0.12
UBCP0CG48 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.33□□□□□ -0.12
UBCP0CG48 MIR3909-201ENST00000579518 119 ntBASIC14.33□□□□□ -0.12
UBCP0CG48 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBCP0CG48 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBCP0CG48 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.33□□□□□ -0.12
UBCP0CG48 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
UBCP0CG48 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBCP0CG48 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBCP0CG48 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms