Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.76□□□□□ -0.05
FREM3P0C091 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.76□□□□□ -0.05
FREM3P0C091 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.76□□□□□ -0.05
FREM3P0C091 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 MPDU1-223ENST00000582151 728 ntBASIC14.76□□□□□ -0.05
FREM3P0C091 AC138761.1-201ENST00000584393 385 ntBASIC14.76□□□□□ -0.05
FREM3P0C091 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
FREM3P0C091 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
FREM3P0C091 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.75□□□□□ -0.05
FREM3P0C091 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.75□□□□□ -0.05
FREM3P0C091 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
FREM3P0C091 SPCS2P4-201ENST00000436160 681 ntBASIC14.75□□□□□ -0.05
FREM3P0C091 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.75□□□□□ -0.05
FREM3P0C091 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.75□□□□□ -0.05
FREM3P0C091 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.75□□□□□ -0.05
FREM3P0C091 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.75□□□□□ -0.05
FREM3P0C091 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.75□□□□□ -0.05
FREM3P0C091 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.75□□□□□ -0.05
FREM3P0C091 PAUPAR-201ENST00000630360 2965 ntBASIC14.75□□□□□ -0.05
FREM3P0C091 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
FREM3P0C091 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.75□□□□□ -0.05
FREM3P0C091 AL513523.2-202ENST00000427283 2040 ntBASIC14.75□□□□□ -0.05
FREM3P0C091 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 AL353705.2-201ENST00000428243 662 ntBASIC14.75□□□□□ -0.05
FREM3P0C091 AC125807.1-201ENST00000483097 614 ntBASIC14.75□□□□□ -0.05
FREM3P0C091 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.75□□□□□ -0.05
FREM3P0C091 AC073592.8-201ENST00000624126 511 ntBASIC14.75□□□□□ -0.05
FREM3P0C091 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.75□□□□□ -0.05
FREM3P0C091 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.75□□□□□ -0.05
FREM3P0C091 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FREM3P0C091 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.75□□□□□ -0.05
FREM3P0C091 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 BCRP1-201ENST00000444246 691 ntBASIC14.74□□□□□ -0.05
FREM3P0C091 UGT1A2P-201ENST00000454886 866 ntBASIC14.74□□□□□ -0.05
FREM3P0C091 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 TEX28P1-201ENST00000613479 1221 ntBASIC14.74□□□□□ -0.05
FREM3P0C091 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 TEX28P2-201ENST00000617764 1221 ntBASIC14.74□□□□□ -0.05
FREM3P0C091 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms